| Accession | HsInv0738 | Region of the inversion | chr10:45604505-51466693 |
| Status | Unreliable prediction | Prediction type | Simple |
| Estimated Inversion Size | 5,814,591 bp | Supporting predictions | 1 |
| Inverted allele frequency | ND | Mechanism of origin | ND |
| Functional effect | Intergenic breakpoints | Breakpoint 1 | chr10:45604505-45652103 |
| Ancestral orientation | NA | Breakpoint 2 | chr10:51419095-51466693 |
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Human Polymorphic Inversion DataBase
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General information
- Region map
+ Predictions
- Martinez-Fundichely et al. 2014 (in preparation)
| Description | Accurate prediction of inversions in the human genome from Kidd et al. 2008 fosmid paired-end mapping data using the GRIAL algorithm, and validation of some predictions by sequence analysis and PCR | ||||||||||||||||||||||||||||||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||||||||||||||||||||||||||||||
| Name | |||||||||||||||||||||||
| Breakpoint 1 | chr10:45604505-45652103 | Breakpoint 2 | chr10:51419095-51466693 | ||||||||||||||||||||
| D/C Score | NA | Disc. Support Prob. | 0 | ||||||||||||||||||||
| Support | 2 probes  | ||||||||||||||||||||||
| Individuals |
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| Comments | Below the threshold of the Discordant Support (DS) probability | ||||||||||||||||||||||
+ Validation and genotyping
No validations are found
+ Frequency
No frequency studied
+ Breakpoints
| Breakpoint 1 | chr10:45604505-45652103 | Breakpoint 2 | chr10:51419095-51466693 | |||||||||||||||||||||||||
| Definition method | Default informatic definition | |||||||||||||||||||||||||||
| Mechanism of origin |
ND
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| Flexibility | 10.76 | GC content | 0.35 | Stability | 1.87 |
| Position SD1 | Size (bp) | Position SD2 | Size (bp) | Identity | Relative orientation |
| chr10:45609369-45622046 | 12,678 | chr10:51462003-51474643 | 12,641 | 0.949 | Inverted |
| chr10:45622006-45623662 | 1,657 | chr10:51451759-51453427 | 1,669 | 0.950 | Inverted |
| chr10:45634024-45746970 | 112,947 | chr10:51334317-51447294 | 112,978 | 0.994 | Inverted |
+ Evolutionary history
| Ancestral allele | NA | Age | ND |
| Derived allele | NA | Origin | ND |
+ Orientation in other species
Not defined
+ Age
Not defined
+ Origin
Not defined
+ Functional effects
No genes disrupted by the inversion breakpoints
+ Inversion phenotypical effects
Not defined
+ Report history
- 2015-02-23 10:14:47
| Breakpoint 1 | chr10:45604505-45652103 | Breakpoint 2 | chr10:51419095-51466693 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
