| Accession | HsInv0839 | Region of the inversion | chr16:54371299-54408107 |
| Status | Predicted | Prediction type | Simple |
| Estimated Inversion Size | 35,965 bp | Supporting predictions | 3 |
| Inverted allele frequency | ND | Mechanism of origin | ND |
| Functional effect | Breaks one gene | Breakpoint 1 | chr16:54371299-54372192 |
| Ancestral orientation | NA | Breakpoint 2 | chr16:54407312-54408107 |
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Human Polymorphic Inversion DataBase
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General information
- Region map
+ Predictions
| Description | Paired-end mapping analysis of the J. Craig Venter genome (HuRef) | ||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr16:54360776-54399633 | Breakpoint 2 | chr16:54405700-54407157 | ||||
| Individuals |
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| Description | Next generation sequencing and analysis by paired-end mapping of an individual genome of African origin | ||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr16:54371222-54371837 | Breakpoint 2 | chr16:54407757-54407878 | ||||
| Individuals |
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| Description | Next generation sequencing and analysis by paired-end mapping of a Korean individual genome | ||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr16:54371592-54371899 | Breakpoint 2 | chr16:54407507-54407912 | ||||
| Individuals |
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+ Validation and genotyping
No validations are found
+ Frequency
No frequency studied
+ Breakpoints
| Breakpoint 1 | chr16:54371299-54372192 | Breakpoint 2 | chr16:54407312-54408107 | |||||||||||||
| Definition method | Default informatic definition | |||||||||||||||
| Mechanism of origin |
ND
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| Flexibility | 10.91 | GC content | 0.4 | Stability | 1.83 |
| Position SD1 | Size (bp) | Position SD2 | Size (bp) | Identity | Relative orientation |
| chr16:54345539-54379462 | 33,924 | chr16:54400016-54430930 | 30,915 | 0.945 | Inverted |
+ Evolutionary history
| Ancestral allele | NA | Age | ND |
| Derived allele | NA | Origin | ND |
+ Orientation in other species
Not defined
+ Age
Not defined
+ Origin
Not defined
+ Functional effects
- CES1
| Gene position | chr16:54394264-54424576 |
| Mechanism | Breaks one gene |
+ Inversion phenotypical effects
Not defined
+ Report history
- 2015-02-23 10:15:19
| Breakpoint 1 | chr16:54371299-54372192 | Breakpoint 2 | chr16:54407312-54408107 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
- 2015-02-23 10:15:19
| Breakpoint 1 | chr16:54371299-54372192 | Breakpoint 2 | chr16:54407312-54408107 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
